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PSDAP
Pharmacological Signature Dataset and Annotation Platform
Bioactive compound
Bioactive compound
Herbal ingredient
Herbal ingredient
Medicinal herb
Medicinal herb
Herbal formula
Herbal formula
Data statistics
 Signature profiles by data source
 
 Unique perturbagens by category
 Signature profiles by category
 Signature profiles by species
 Dataset summary by perturbagen category and data source
Source Platform Perturbagen
category		 Experimental
system		 No. of
experimental models		 No. of
perturbagens		 No. of
signature profiles		 Reference
CIGS RNA-seq Bioactive compound in vitro 2 11270 22712
link
Herbal ingredient in vitro 2 1856 7448
Connectivity Map
(LINCS L1000)		 L1000 assay Bioactive compound in vitro 9 10403 45811
link
DrugMatrix Microarray Bioactive compound in vitro 1 125 269
link
in vivo 8 640 5019
GSE264002 RNA-seq Herbal ingredient in vivo 1 39 39
link
GSE69851 Microarray Bioactive compound in vitro 4 34 403
link
GSE85871 Microarray Herbal ingredient in vitro 1 102 103
link
KORE-Map RNA-seq Bioactive compound in vitro 4 3 15
link
link
link
Herbal formula,
Medicinal herb		 in vitro 4 42 1008
Open TG-GATEs Microarray Bioactive compound in vitro 2 164 2198
link
in vivo 2 160 4499
PANACEA RNA-seq Bioactive compound in vitro 11 32 352
link
TCM Atlas Microarray,
RNA-seq		 Herbal ingredient,
Medicinal herb		 in vitro 49 127 278
link
in vivo 1 1 1
Total (unique) 76 21007 90155  
* A signature profile represents the results of differential gene expression analysis from a single treatment–control-matched comparison.